Information for motif22


Reverse Opposite:

p-value:1e-28
log p-value:-6.557e+01
Information Content per bp:1.589
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets94.8 +/- 61.8bp
Average Position of motif in Background98.1 +/- 44.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TACCATTCTGTC--
NNNCCATTGTGTNAN

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TACCATTCTGTC
NNGCACCTTTCTCC-

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TACCATTCTGTC--
TGTTCCCATTGTGTACT

MA0143.3_Sox2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TACCATTCTGTC
--CCTTTGTT--

MA0515.1_Sox6/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TACCATTCTGTC
--CCATTGTTTT

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TACCATTCTGTC
--CCWTTGTY--

MA0095.2_YY1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TACCATTCTGTC
GCNGCCATCTTG--

MA0078.1_Sox17/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TACCATTCTGTC
-CTCATTGTC--

MA0442.1_SOX10/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TACCATTCTGTC
---CTTTGT---

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TACCATTCTGTC
--CCATTGTTNY