Information for motif24


Reverse Opposite:

p-value:1e-26
log p-value:-6.107e+01
Information Content per bp:1.847
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.9 +/- 54.5bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ATTAGACATGTT
NNAATTAGTCACGGT

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTAGACATGTT----
ANTNNTACATGTANNTN

MA0132.1_Pdx1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATTAGACATGTT
AATTAG-------

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTAGACATGTT----
NNTTTTACATGTANNNT

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATTAGACATGTT-----
TAAATACATGTAAAATT

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATTAGACATGTT----
ANTATTACATGTANNNN

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATTAGACATGTT-----
AATATACATGTAATATA

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTAGACATGTT----
ANTTNTACATGTANTTN

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATTAGACATGTT----
--NNGTANTGTTTTNC

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATTAGACATGTT
CCGTATTATAAACAA-