Information for motif25


Reverse Opposite:

p-value:1e-26
log p-value:-6.034e+01
Information Content per bp:1.696
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets94.2 +/- 42.9bp
Average Position of motif in Background56.8 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TACTCACCTCAA
NNACTTACCTN--

MA0595.1_SREBF1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TACTCACCTCAA
--ATCACCCCAC

MA0103.2_ZEB1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TACTCACCTCAA
-CCTCACCTG--

MA0596.1_SREBF2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TACTCACCTCAA
--ATCACCCCAT

MA0018.2_CREB1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TACTCACCTCAA
---TGACGTCA-

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TACTCACCTCAA
ATTAACACCT---

MA0032.1_FOXC1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TACTCACCTCAA
TACTNNNN----

MA0071.1_RORA_1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TACTCACCTCAA-
---TGACCTTGAT

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TACTCACCTCAA-
NNTTTTCACACCTTNNN

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TACTCACCTCAA
--ATCACCCCAT