Information for motif27


Reverse Opposite:

p-value:1e-23
log p-value:-5.521e+01
Information Content per bp:1.530
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets108.2 +/- 55.0bp
Average Position of motif in Background68.7 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AATGCGCTCG--
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATGCGCTCG--
ATAAGGGCGCGCGAT

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATGCGCTCG----
NNTTTGCACACGGCCC

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AATGCGCTCG---
NCANGCGCGCGCGCCA

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATGCGCTCG-
GACGATAATGAGCTTGC

PH0152.1_Pou6f1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AATGCGCTCG-
AAACATAATGAGGTTGC

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AATGCGCTCG
----NGCTN-

NRF1/Promoter/Homer

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AATGCGCTCG
GTGCGCATGCGC---

MA0506.1_NRF1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AATGCGCTCG---
--TGCGCAGGCGC

PH0126.1_Obox6/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AATGCGCTCG-
CNATAATCCGNTTNT