Information for motif28


Reverse Opposite:

p-value:1e-23
log p-value:-5.501e+01
Information Content per bp:1.693
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets106.8 +/- 57.8bp
Average Position of motif in Background120.4 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTACAAACCATA--
----AAACCACANN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTACAAACCATA-
---NAAACCACAG

MA0511.1_RUNX2/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTACAAACCATA------
---CAAACCACAAACCCC

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TTACAAACCATA
CCGTATTATAAACAA--

MA0040.1_Foxq1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTACAAACCATA
-AATAAACAATN

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTACAAACCATA---
----AAACCACAGAN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTACAAACCATA--
----AAACCACAGC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTACAAACCATA---
---NWAACCACADNN

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTACAAACCATA----
NNTAAAAACGATGTTNT

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTACAAACCATA---
NNNTCCATCCCATAANN