Information for motif39


Reverse Opposite:

p-value:1e-14
log p-value:-3.288e+01
Information Content per bp:1.840
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets101.1 +/- 58.2bp
Average Position of motif in Background52.6 +/- 40.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCGTCGAR------
TCCGTCGCTTAAAAG

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTCGAR--
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTCGAR--
NNNNTTGGCGCCGANNN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCGTCGAR
TGCGTG---

PB0131.1_Gmeb1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GCGTCGAR--
TNAACGACGTCGNCCA

MA0130.1_ZNF354C/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCGTCGAR
--GTGGAT

MA0018.2_CREB1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCGTCGAR
TGACGTCA--

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCGTCGAR
ACGTCA--

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCGTCGAR
GCTTCC--

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------GCGTCGAR--
GCGGAGGTGTCGCCTC