Information for motif6


Reverse Opposite:

p-value:1e-39
log p-value:-8.992e+01
Information Content per bp:1.851
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets115.3 +/- 52.8bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTTTCTACATGC
NNGCACCTTTCTCC----

PH0084.1_Irx3_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTTTCTACATGC------
-AATATACATGTAATATA

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTTTCTACATGC------
-TAAATACATGTAAAATT

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTTCTACATGC-----
ANTNNTACATGTANNTN

MA0442.1_SOX10/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTTTCTACATGC
CTTTGT------

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTTCTACATGC-----
ANTATTACATGTANNNN

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTTCTACATGC-----
ANTTNTACATGTANTTN

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTTTCTACATGC-----
NNTTTTACATGTANNNT

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTTCTACATGC---
ACTTGCTACCTACACC

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTTTCTACATGC
-TTGCAACATN-