Information for motif8


Reverse Opposite:

p-value:1e-36
log p-value:-8.302e+01
Information Content per bp:1.919
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets109.9 +/- 47.0bp
Average Position of motif in Background112.1 +/- 53.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---TTACAATTAT--
NNNTAACAATTATAN

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TTACAATTAT
NNCNNAACAATTNT

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTACAATTAT---
TNCNNAACAATTTTTNC

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TTACAATTAT-
GCTAATTATAATTATC

MA0075.1_Prrx2/Jaspar

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TTACAATTAT
----AATTA-

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTACAATTAT-
NANTATTATAATTNNN

MA0063.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TTACAATTAT
---CAATTAA

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TTACAATTAT-
TTTAATTATAATTAAG

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TTACAATTAT-
----AATTATT

PH0022.1_Dlx3/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTACAATTAT-----
NNNGGTAATTATNGNGN