Information for motif9


Reverse Opposite:

p-value:1e-35
log p-value:-8.190e+01
Information Content per bp:1.715
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets87.7 +/- 49.2bp
Average Position of motif in Background75.6 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAAATGCTAGTT-
GATAACATCCTAGTAG

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAAATGCTAGTT-----
-ACTTGCTACCTACACC

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAAATGCTAGTT
-TTATGCAAAT-

MA0507.1_POU2F2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAAATGCTAGTT--
-ATATGCAAATNNN

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAAATGCTAGTT
-ATATGCAAAT-

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAAATGCTAGTT------
-GAAAACTAGTTAACATC

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAATGCTAGTT---
TTGTATGCAAATTAGA

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAAATGCTAGTT-----
-ACATGCTACCTAATAC

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAATGCTAGTT---
TTGTATGCAAATTAGA

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAAATGCTAGTT-------
--ANNNCTAGTTAACNGNN