Information for motif16


Reverse Opposite:

p-value:1e-21
log p-value:-4.843e+01
Information Content per bp:1.557
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.3 +/- 44.6bp
Average Position of motif in Background91.6 +/- 50.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGCTGYGGGAA
-NGCTN------

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATGCTGYGGGAA
--GCTGTG----

MA0117.1_Mafb/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATGCTGYGGGAA
--GCTGACGC--

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTGYGGGAA
TCNCCTGCTGNGNNN-

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTGYGGGAA
TNTCCTGCTGTGNNG-

MA0597.1_THAP1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATGCTGYGGGAA-
----TNNGGGCAG

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATGCTGYGGGAA
-TGCTGACTCA-

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATGCTGYGGGAA--
----GGCGGGAARN

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATGCTGYGGGAA--------
NNCCTGNAAAAAAAAAAAAA

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATGCTGYGGGAA--------
NNCCTGNAAAAAAAAAAAAA