Information for motif26


Reverse Opposite:

p-value:1e-16
log p-value:-3.791e+01
Information Content per bp:1.697
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets100.2 +/- 53.8bp
Average Position of motif in Background161.2 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGTCCTGGTCCA---
GAGCCCTTGTCCCTAA

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTCCTGGTCCA
AGGCCTNG----

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTCCTGGTCCA
AGGCCTAG----

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGTCCTGGTCCA-
CAGGCCNNGGCCNN

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTCCTGGTCCA
ACATCCTGNT---

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGTCCTGGTCCA--
----CTGTTCCTGG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCTGGTCCA
GCATTCCAGN----

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCTGGTCCA---
NNANTGGTGGTCTTNNN

Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------AGTCCTGGTCCA--
ACTYKNATTCGTGNTACTTC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCTGGTCCA
RCATTCCWGG----