Information for motif27


Reverse Opposite:

p-value:1e-16
log p-value:-3.791e+01
Information Content per bp:1.435
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets108.1 +/- 50.3bp
Average Position of motif in Background121.8 +/- 42.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0048.1_NHLH1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTTAGTCC
NCGCAGCTGCGN--

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCAGCTTAGTCC
HCAGCTGDTN--

MA0522.1_Tcf3/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTTAGTCC
NTGCAGCTGTG---

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTTAGTCC
ANCAGCTG-----

MA0591.1_Bach1::Mafk/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCAGCTTAGTCC----
-NTGCTGAGTCATCCN

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTTAGTCC
AACAGCTG-----

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCAGCTTAGTCC
GCAGCTGTNN--

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCAGCTTAGTCC-
-HTGCTGAGTCAT

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCAGCTTAGTCC--
--TGCTGAGTCATC

MA0164.1_Nr2e3/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAGCTTAGTCC
-AAGCTTG----