Information for motif31


Reverse Opposite:

p-value:1e-14
log p-value:-3.271e+01
Information Content per bp:1.508
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets110.2 +/- 39.8bp
Average Position of motif in Background110.6 +/- 85.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0183.1_Sry_2/Jaspar

Match Rank:1
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TTGTCCCGTCAG
CNNNTATTGTTCNNNNN-

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTGTCCCGTCAG---
TTTTTTTTTTTTTTCAGGTT

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCCGTCAG
CCATTGTTNY-----

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TTGTCCCGTCAG
AATCAATTGTTCCGCTA-

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTGTCCCGTCAG--
--GTGACGTCACCG

MA0515.1_Sox6/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCCGTCAG
CCATTGTTTT-----

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTGTCCCGTCAG---
TTTTTTTTTTTTTTCAGGTT

MA0117.1_Mafb/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TTGTCCCGTCAG-
-----NCGTCAGC

MA0078.1_Sox17/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTGTCCCGTCAG
CTCATTGTC-------

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCCCGTCAG-
NNANTTGACCCCTNNNN