Information for motif32


Reverse Opposite:

p-value:1e-14
log p-value:-3.263e+01
Information Content per bp:1.950
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets124.1 +/- 55.6bp
Average Position of motif in Background83.6 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0027.1_Gmeb1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TACGTATC---
NNNTNGTACGTAANNNN

MA0124.1_NKX3-1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TACGTATC
TAAGTAT-

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TACGTATC
TACTNNNN

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TACGTATC
BGCACGTA--

MA0025.1_NFIL3/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TACGTATC--
TTATGTAACAT

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TACGTATC-------
NTNNCGTATCCAAGTNN

MA0043.1_HLF/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TACGTATC-
NATTACGTAACC

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TACGTATC-
GCACGTACCC

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TACGTATC------
ACCCGTATCAAATTT

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TACGTATC-----
TNNTTTCGTATTNNANN