Information for motif39


Reverse Opposite:

p-value:1e-11
log p-value:-2.581e+01
Information Content per bp:1.948
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif59.3
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets99.3 +/- 50.8bp
Average Position of motif in Background97.3 +/- 55.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0033.1_FOXL1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGACATAC
TATACATA-

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------AGACATAC--
CAAATCCAGACATCACA

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGACATAC-----
-----TACTNNNN

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGACATAC-----
TCTTTGGCGTACCCTAA

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGACATAC
CCAGACAG--

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGACATAC
CCAGACRSVB

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGACATAC---
NNACTTACCTN

POL007.1_BREd/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGACATAC
-NANANAC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGACATAC----
--RCATTCCWGG

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGACATAC
BCAGACWA--