Information for motif40


Reverse Opposite:

p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets132.8 +/- 53.2bp
Average Position of motif in Background38.4 +/- 45.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTGACAGTGG---
NNNNTGCCAGTGATTG

MA0100.2_Myb/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGACAGTGG-
-TGGCAGTTGN

MA0498.1_Meis1/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CTGACAGTGG
NNNTGAGTGACAGCT-

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGACAGTGG-
-TGGCAGTTGG

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTGACAGTGG---
GATATTGACAGCTGCGT

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTGACAGTGG
GGTGYTGACAGS--

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGACAGTGG----
NNNTGGCAGTTGGTNN

MA0143.3_Sox2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGACAGTGG
--AACAAAGG

MA0078.1_Sox17/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGACAGTGG-
--GACAATGNN

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGACAGTGG---
NNATTGACAGGTGCTT