Information for motif41


Reverse Opposite:

p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets74.3 +/- 56.9bp
Average Position of motif in Background73.0 +/- 53.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0083.1_Tcf7_1/Jaspar

Match Rank:1
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------TCAAAGCAAT-
TATAGATCAAAGGAAAA

PB0082.1_Tcf3_1/Jaspar

Match Rank:2
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------TCAAAGCAAT-
TATAGATCAAAGGAAAA

MA0523.1_TCF7L2/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----TCAAAGCAAT
AAAGATCAAAGGAA-

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TCAAAGCAAT-
NNNAGATCAAAGGANNN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TCAAAGCAAT
ACATCAAAGG---

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TCAAAGCAAT
ACATCAAAGGNA-

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TCAAAGCAAT-
NANAGATCAAAGGGNNN

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCAAAGCAAT
ACWTCAAAGG---

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCAAAGCAAT--
NTTNAGAACAATTA

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCAAAGCAAT----
NNTNANAACAATTNNA