Information for motif43


Reverse Opposite:

p-value:1e-7
log p-value:-1.832e+01
Information Content per bp:1.911
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif50.6
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets95.7 +/- 56.2bp
Average Position of motif in Background114.3 +/- 54.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CGCTCCGT
-GCTCCG-

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGCTCCGT---
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGCTCCGT---
ANCGCGCGCCCTTNN

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGCTCCGT----
GGTCCCGCCCCCTTCTC

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGCTCCGT
NGCTN---

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCCGT-----
NNGCACCTTTCTCC

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CGCTCCGT---
TCACCCCGCCCCAAATT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGCTCCGT---
ATCCCCGCCCCTAAAA

POL001.1_MTE/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTCCGT------
NCGACCGCTCCGCTCGAAA

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCTCCGT
AGCGCGCC--