Information for motif44


Reverse Opposite:

p-value:1e-6
log p-value:-1.600e+01
Information Content per bp:1.970
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets99.1 +/- 55.5bp
Average Position of motif in Background100.4 +/- 55.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGGTGCCG
CGGAGC--

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGGTGCCG---
-GGTCCCGCCC

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGGTGCCG----
GCGGAGGTGTCGCCTC

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGTGCCG------
GGGTGTGCCCAAAAGG

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTGCCG----
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTGCCG----
NNNNTTGGCGCCGANNN

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTGCCG
GGGGGCGGGGCC-

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGTGCCG
AGCGCGCC-

CRE(bZIP)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGTGCCG----
CGGTGACGTCAC

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGGTGCCG
AGGTGTCA