Information for motif6


Reverse Opposite:

p-value:1e-26
log p-value:-6.196e+01
Information Content per bp:1.832
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets81.2 +/- 51.7bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TCGACCGCCC------
ATCCCCGCCCCTAAAA

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCGACCGCCC----
TATCGACCCCCCACAG

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCGACCGCCC------
TCACCCCGCCCCAAATT

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCGACCGCCC-------
GGTCCCGCCCCCTTCTC

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCGACCGCCC-------
---TCCGCCCCCGCATT

MA0162.2_EGR1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCGACCGCCC-----
-CCCCCGCCCCCGCC

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCGACCGCCC------
-GCCCCGCCCCCTCCC

MA0079.3_SP1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGACCGCCC--
-GCCCCGCCCCC

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCGACCGCCC---
-GGACCACCCACG

MA0024.2_E2F1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCGACCGCCC-
CCTCCCGCCCN