Information for motif1


Reverse Opposite:

p-value:1e-37
log p-value:-8.723e+01
Information Content per bp:1.851
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.2 +/- 52.0bp
Average Position of motif in Background77.0 +/- 48.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCTGTCAA---
AAGCACCTGTCAATAT

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCTGTCAA---
AAAGACCTGTCAATAC

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCTGTCAA---
AACGAGCTGTCAATAC

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCTGTCAA---
AAAGACCTGTCAATCC

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCTGTCAA---
AATTACCTGTCAATAC

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTCTGTCAA----
NNNCAGCTGTCAATATN

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCTGTCAA---
AACTAGCTGTCAATAC

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCTGTCAA----
AGGACGCTGTAAAGGGA

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGCTCTGTCAA----
AAGACGCTGTAAAGCGA

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGGCTCTGTCAA----
----SCTGTCARCACC