Information for motif10


Reverse Opposite:

p-value:1e-21
log p-value:-4.958e+01
Information Content per bp:1.694
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets110.0 +/- 47.3bp
Average Position of motif in Background162.9 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGGTAATGATAA
-GKTAATGR---

MA0046.1_HNF1A/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGTAATGATAA--
GGTTAATAATTAAC

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGGTAATGATAA--
----NBWGATAAGR

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GGGTAATGATAA--
------AGATAASR

PB0064.1_Sox14_1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGTAATGATAA-----
-GCTAATTATAATTATC

PH0022.1_Dlx3/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGTAATGATAA---
NNNGGTAATTATNGNGN

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGTAATGATAA------
-TAAACTGATAAGAAGAT

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGTAATGATAA------
-TATAGAGATAAGAATTG

PH0017.1_Cux1_2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGGTAATGATAA------
---TAATGATGATCACTA

PH0023.1_Dlx4/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGTAATGATAA---
GTCGGTAATTATNGNGN