Information for motif12


Reverse Opposite:

p-value:1e-21
log p-value:-4.958e+01
Information Content per bp:1.712
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.5 +/- 57.7bp
Average Position of motif in Background120.5 +/- 41.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:GACGTATTTCCA--
----ATTTTCCATT

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.70
Offset:5
Orientation:forward strand
Alignment:GACGTATTTCCA
-----TTTTCCA

MA0136.1_ELF5/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GACGTATTTCCA-
----TACTTCCTT

MA0156.1_FEV/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GACGTATTTCCA-
-----ATTTCCTG

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GACGTATTTCCA---
-----ATTTCCTGTN

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GACGTATTTCCA
----TGTTTACA

MA0507.1_POU2F2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GACGTATTTCCA---
--TTCATTTGCATAT

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GACGTATTTCCA---
-----ATTTGCATAA

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GACGTATTTCCA-
TTTTACGACTTTCCAT

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GACGTATTTCCA----
---TTACTTCCTNGTN