Information for motif15


Reverse Opposite:

p-value:1e-20
log p-value:-4.740e+01
Information Content per bp:1.866
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.5 +/- 46.3bp
Average Position of motif in Background75.7 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCTACTTA
CNAGGCCT-----

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAGGCCTACTTA
-AGGCCTAG---

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CAGGCCTACTTA
GGGGCCGAGGCCTG----

MA0072.1_RORA_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGGCCTACTTA--
TTGACCTANTTATN

MA0124.1_NKX3-1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAGGCCTACTTA
-----ATACTTA

PH0094.1_Lhx4/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGGCCTACTTA-----
CAAAGCTAATTAGNTTN

PH0027.1_Emx2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGGCCTACTTA------
-ACCACTAATTAGTGGAC

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAGGCCTACTTA
----NCTAATTA

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGCCTACTTA
NNGGCCACGCCTTTN--

PH0031.1_Evx1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGGCCTACTTA------
-AGAACTAATTAGTGGAC