Information for motif18


Reverse Opposite:

p-value:1e-20
log p-value:-4.625e+01
Information Content per bp:1.804
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets110.1 +/- 61.4bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AMCATTAGTGAA----
NAAANTTATTGAANCAN

MA0158.1_HOXA5/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AMCATTAGTGAA
--AATTAGTG--

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AMCATTAGTGAA---
AGTTATTAATGAGGTC

MA0132.1_Pdx1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AMCATTAGTGAA
--AATTAG----

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AMCATTAGTGAA-----
ANNNCTAGTTAACNGNN

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AMCATTAGTGAA------
-NTTTTAGTTAACNNAGN

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AMCATTAGTGAA------
-NNNTTAGTTAACTNANN

PB0005.1_Bbx_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AMCATTAGTGAA---
NANTTCATTGAATTA

PB0068.1_Sox1_1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AMCATTAGTGAA------
--NNNTATTGAATTGNNN

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AMCATTAGTGAA----
ACTATGAATGAATGAT