Information for motif19


Reverse Opposite:

p-value:1e-19
log p-value:-4.459e+01
Information Content per bp:1.858
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.1 +/- 43.8bp
Average Position of motif in Background37.2 +/- 41.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GGGGCATACC----
TCTTTGGCGTACCCTAA

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCATACC-
NNNNTTGGGCACNNCN

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGGGCATACC----
GCTGGGGGGTACCCCTT

MA0101.1_REL/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGGCATACC
GGGGATTTCC

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGGGCATACC
GGGGATTTCC

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGGCATACC-
GGGGGAATCCCC

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGGCATACC-
NGGGGATTTCCC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGGGCATACC---
---RCATTCCWGG

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGGGCATACC---
NNNTNGGGCGTATNNTN

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGCATACC
NNNATTGGGGGTNTCCT