Information for motif2


Reverse Opposite:

p-value:1e-33
log p-value:-7.757e+01
Information Content per bp:1.776
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.7 +/- 53.7bp
Average Position of motif in Background110.5 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCATGGTAC-
NNNNTGAGCACTGTNNG

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGAGCATGGTAC--
GGAGAAAGGTGCGA

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGAGCATGGTAC-
NNAGGGGCGGGGTNNA

MA0592.1_ESRRA/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCATGGTAC
NGTGACCTTGG---

MA0138.2_REST/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGCATGGTAC----
GGCGCTGTCCATGGTGCTGAA

MA0526.1_USF2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGAGCATGGTAC-
--GTCATGTGACC

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGAGCATGGTAC
GGTTGCCATGGCAA

MA0058.2_MAX/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGAGCATGGTAC
AAGCACATGG---

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGAGCATGGTAC---
GGAGCTGTCCATGGTGCTGA

MA0106.2_TP53/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------TGAGCATGGTAC
CATGTCTGGGCATGT---