Information for motif20


Reverse Opposite:

p-value:1e-19
log p-value:-4.453e+01
Information Content per bp:1.817
Number of Target Sequences with motif237.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif171.9
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets107.4 +/- 54.8bp
Average Position of motif in Background106.8 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TAAGATCAAA------
NANAGATCAAAGGGNNN

MA0523.1_TCF7L2/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TAAGATCAAA----
AAAGATCAAAGGAA

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TAAGATCAAA------
TATAGATCAAAGGAAAA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TAAGATCAAA------
NNNAGATCAAAGGANNN

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.75
Offset:2
Orientation:forward strand
Alignment:TAAGATCAAA----
--ACATCAAAGGNA

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TAAGATCAAA------
TATAGATCAAAGGAAAA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TAAGATCAAA--
--ACATCAAAGG

MA0160.1_NR4A2/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TAAGATCAAA
-AAGGTCAC-

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TAAGATCAAA--
--ACWTCAAAGG

MA0151.1_ARID3A/Jaspar

Match Rank:10
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TAAGATCAAA
----ATTAAA