Information for motif21


Reverse Opposite:

p-value:1e-18
log p-value:-4.298e+01
Information Content per bp:1.858
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.8 +/- 55.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0596.1_SREBF2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCATATCAGCCC--
----ATCACCCCAT

MA0117.1_Mafb/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCATATCAGCCC
--NCGTCAGC--

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GCATATCAGCCC
------CAGCC-

MA0595.1_SREBF1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCATATCAGCCC--
----ATCACCCCAC

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCATATCAGCCC-----
AAGCATACGCCCAACTT

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCATATCAGCCC-
NTNTTCTTATCAGTNTN

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCATATCAGCCC---
TCNNTTTACAGCGNNNT

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCATATCAGCCC--
----ATCACCCCAT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCATATCAGCCC
---YAACBGCC-

MA0597.1_THAP1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GCATATCAGCCC---
------CTGCCCGCA