Information for motif26


Reverse Opposite:

p-value:1e-15
log p-value:-3.640e+01
Information Content per bp:1.772
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets119.8 +/- 51.2bp
Average Position of motif in Background22.9 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAAGCCSGAT----
AANNATCCGGATGTNN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAAGCCSGAT-
-ATGCCAGACN

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAAGCCSGAT--
--ANCAGGATGT

MA0028.1_ELK1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAAGCCSGAT-
-GAGCCGGAAG

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAAGCCSGAT
-CAGCC----

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAAGCCSGAT---
---RCCGGAARYN

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAGCCSGAT
AGCGCGCC----

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAAGCCSGAT-------
AAGGCCAGATGGTCCGG

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAAGCCSGAT----
TCGTACCCGCATCATT

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAAGCCSGAT
TAATCCCN--