Information for motif33


Reverse Opposite:

p-value:1e-13
log p-value:-3.118e+01
Information Content per bp:1.594
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.3 +/- 50.4bp
Average Position of motif in Background53.0 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCTCTCGTAGC----
NNNTTAGGTAGCNTNT

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCTCTCGTAGC
ACCACTCTCGGTCAC-

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCGTAGC
ACTTTCACTTTC-

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCGTAGC-
GNNATTTGTCGTAANN

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTCGTAGC
NNAATTCTCGNTNAN-

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTCTCTCGTAGC-
CTGTCTGTCACCT

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTCTCTCGTAGC
CTGTCTGG----

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:8
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------CTCTCTCGTAGC--
ANAGTGCCACCTGGTGGCCA

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCGTAGC-
AGTATTCTCGGTTGC

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CTCTCTCGTAGC----
NNTGTAGGTAGCANNT