Information for motif34


Reverse Opposite:

p-value:1e-13
log p-value:-3.002e+01
Information Content per bp:1.698
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets113.1 +/- 52.1bp
Average Position of motif in Background128.0 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACTATGATCAC--
TAATGATGATCACTA

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GACTATGATCAC------
-NNNNTGAGCACTGTNNG

MA0078.1_Sox17/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GACTATGATCAC
GACAATGNN---

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GACTATGATCAC--
AATCCCTTTGATCTATC

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GACTATGATCAC--
ATTTCCTTTGATCTATA

MA0114.2_HNF4A/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GACTATGATCAC
CTGGACTTTGGACTC

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GACTATGATCAC--
TGGACTTTGNNCTNTG

MA0484.1_HNF4G/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GACTATGATCAC-
TGGACTTTGNNCTCN

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GACTATGATCAC-
-SCTGTCARCACC

MA0523.1_TCF7L2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GACTATGATCAC-
TNCCTTTGATCTTN