Information for motif35


Reverse Opposite:

p-value:1e-12
log p-value:-2.942e+01
Information Content per bp:1.530
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets100.3 +/- 58.0bp
Average Position of motif in Background119.8 +/- 50.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0155.1_INSM1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGGCTGGGGT--
TGTCAGGGGGCG

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGGCTGGGGT
-GGGGGGGG-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGGCTGGGGT--
--GCTGTGGTTT

MA0039.2_Klf4/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGCTGGGGT
TGGGTGGGGC

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGGGT
TWGTCTGV---

MA0493.1_Klf1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGCTGGGGT-
TGGGTGTGGCN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGGGGT-
NTGGGTGTGGCC

PB0167.1_Sox13_2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGGCTGGGGT---
GTATTGGGTGGGTAATT

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCTGGGGT--
NAGANTGGCGGGGNGNA

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGCTGGGGT
TGGGTGTGGC