Information for motif37


Reverse Opposite:

p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.790
Number of Target Sequences with motif2419.0
Percentage of Target Sequences with motif15.40%
Number of Background Sequences with motif2938.7
Percentage of Background Sequences with motif13.49%
Average Position of motif in Targets100.4 +/- 56.2bp
Average Position of motif in Background102.1 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0150.1_Pou4f3/Jaspar

Match Rank:1
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------ATTAATAA--
GACNTCATTAATAANN

PH0172.1_Tlx2/Jaspar

Match Rank:2
Score:0.83
Offset:-6
Orientation:forward strand
Alignment:------ATTAATAA---
TAATTAATTAATAACTA

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:3
Score:0.83
Offset:-6
Orientation:reverse strand
Alignment:------ATTAATAA--
GANGTAATTAATTANN

PH0120.1_Nkx6-3/Jaspar

Match Rank:4
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----ATTAATAA-----
GAAAATTAATTACTTTG

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:5
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----ATTAATAA-----
GAAAATTAATTACTTCG

PH0019.1_Dbx2/Jaspar

Match Rank:6
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----ATTAATAA----
TTTAATTAATTAATTC

PH0142.1_Pou1f1/Jaspar

Match Rank:7
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----ATTAATAA----
GATTAATTAATTAAGTC

PH0149.1_Pou3f4/Jaspar

Match Rank:8
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----ATTAATAA----
AATTAATTAATTAATTC

PH0063.1_Hoxb8/Jaspar

Match Rank:9
Score:0.80
Offset:-7
Orientation:forward strand
Alignment:-------ATTAATAA-
ACCGGCAATTAATAAA

PH0080.1_Hoxd8/Jaspar

Match Rank:10
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----ATTAATAA----
NAGCCATTAATTANTTA