Information for motif4


Reverse Opposite:

p-value:1e-30
log p-value:-7.048e+01
Information Content per bp:1.854
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets113.0 +/- 54.8bp
Average Position of motif in Background96.2 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACCTTCAATGAT---
NANTTCATTGAATTA

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACCTTCAATGAT----
ACTATGAATGAATGAT

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------ACCTTCAATGAT
NNNNATGACCTTGANTN--

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACCTTCAATGAT
NTGACCTTGA-----

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACCTTCAATGAT--------
---TNNNATGATTTCNNCNN

MA0070.1_PBX1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ACCTTCAATGAT--
--TTTGATTGATGN

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACCTTCAATGAT---
GAAGATCAATCACTTA

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACCTTCAATGAT
-GCTTCC-----

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ACCTTCAATGAT-
------AATAATT

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACCTTCAATGAT----
TCTTTCGAGGAATTTG