Information for motif41


Reverse Opposite:

p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.949
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets87.4 +/- 48.6bp
Average Position of motif in Background41.1 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CGACGCCA-----
CCTTCGGCGCCAAAAGG

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CGACGCCA-----
AGCTCGGCGCCAAAAGC

MA0018.2_CREB1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGACGCCA
TGACGTCA

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.69
Offset:-8
Orientation:reverse strand
Alignment:--------CGACGCCA
NNTTTANNCGACGNA-

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGACGCCA
AGCGCGCC-

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGACGCCA
--ACGTCA

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGACGCCA-----
TACGCCCCGCCACTCTG

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGACGCCA----
NNGGCGACACCTCNNN

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGACGCCA
GATGACGTCA

PB0004.1_Atf1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGACGCCA----
ACGATGACGTCATCGA