Information for motif45


Reverse Opposite:

p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.927
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets102.6 +/- 52.7bp
Average Position of motif in Background72.4 +/- 50.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATACGTAG
ATACTTA-

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----ATACGTAG----
NNNTNGTACGTAANNNN

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------ATACGTAG---
CATACAATACGAAATAA

MA0032.1_FOXC1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATACGTAG-
-TACTNNNN

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATACGTAG-
-TACGTGCV

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATACGTAG
GGGTACGTGC

MA0033.1_FOXL1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ATACGTAG
TATACATA-----

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATACGTAG
GGACGTGC

PB0131.1_Gmeb1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ATACGTAG----
TNAACGACGTCGNCCA

MA0025.1_NFIL3/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATACGTAG---
TTATGTAACAT