Information for motif46


Reverse Opposite:

p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.906
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets114.9 +/- 52.8bp
Average Position of motif in Background135.6 +/- 51.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0043.1_HLF/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CGTAACCG
NATTACGTAACC-

E-box(HLH)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGTAACCG-
TCACGTGACCGG

MA0067.1_Pax2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTAACCG
NCGTGACN-

MA0093.2_USF1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGTAACCG
GCCACGTGACC-

PB0027.1_Gmeb1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------CGTAACCG-
NNNTNGTACGTAANNNN

PB0038.1_Jundm2_1/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CGTAACCG-
CCGATGACGTCATCGT

CRE(bZIP)/Promoter/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGTAACCG
GTGACGTCACCG

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CGTAACCG-
ACGATGACGTCATCGA

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGTAACCG
ACGTCA---

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGTAACCG--
CGTATCGAAACCAAA