Information for motif47


Reverse Opposite:

p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.946
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif25.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets91.7 +/- 60.7bp
Average Position of motif in Background102.2 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CACCGTAG-----
ATTTACAGTAGCAAAA

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CACCGTAG-----
ATGTACAGTAGCAAAG

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACCGTAG
GGTAAGTA-

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CACCGTAG----
TTGAAAACCGTTAATTT

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CACCGTAG----
ATGGAAACCGTTATTTT

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CACCGTAG-------
TACCATAGCAACGGT

MA0116.1_Zfp423/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CACCGTAG-----
GCACCCCTGGGTGCC

MA0109.1_Hltf/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CACCGTAG--
AACCTTATAT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CACCGTAG
NAAACCACAG

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CACCGTAG-
AAACCACAGC