Information for motif5


Reverse Opposite:

p-value:1e-24
log p-value:-5.637e+01
Information Content per bp:1.590
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.8 +/- 55.0bp
Average Position of motif in Background163.7 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATACTACTCCAG
--RSCACTYRAG

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATACTACTCCAG----
--NNTAATCCNGNCNN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATACTACTCCAG---
-----ATGCCAGACN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ATACTACTCCAG
-CNGTCCTCCC-

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATACTACTCCAG
--GCTAATCC--

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ATACTACTCCAG
-AGCCACTCAAG

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ATACTACTCCAG
------ATCCAC

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ATACTACTCCAG-
NNAGTCCCACTCNNNN

MA0152.1_NFATC2/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ATACTACTCCAG
----TTTTCCA-

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ATACTACTCCAG----
NNNATTAATCCGNTTNA