Information for motif50


Reverse Opposite:

p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.938
Number of Target Sequences with motif553.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif599.4
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets98.3 +/- 54.9bp
Average Position of motif in Background100.7 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTCCGAT
GCTCCG--

MF0001.1_ETS_class/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTCCGAT
CTTCCGGT

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCTCCGAT-----
AATCCCTTTGATCTATC

ETS(ETS)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCGAT-
ACTTCCGGTT

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCTCCGAT----
NNNTCCATCCCATAANN

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCGAT-
ACTTCCGGNT

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCTCCGAT-----
ATTTCCTTTGATCTATA

PB0020.1_Gabpa_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTCCGAT----
NNNNACTTCCGGTATNN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTCCGAT
HACTTCCGGY

MA0028.1_ELK1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTCCGAT--
CTTCCGGNNN