Information for motif51


Reverse Opposite:

p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.530
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets73.7 +/- 57.2bp
Average Position of motif in Background108.7 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TACATTTATC--
ANTNTTACATGTATNTA

PH0084.1_Irx3_2/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TACATTTATC--
NNTATTACATGTANNNT

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TACATTTATC--
ANTATTACATGTANNNN

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TACATTTATC--
ANTTNTACATGTANTTN

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TACATTTATC--
ANTNNTACATGTANNTN

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TACATTTATC-
-TCATCAATCA

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TACATTTATC--
NNTTTTACATGTANNNT

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TACATTTATC-----
-ACATTCATGACACG

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TACATTTATC--
NNCATTCATTCATNNN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TACATTTATC-
---YSTTATCT