Information for motif54


Reverse Opposite:

p-value:1e-5
log p-value:-1.233e+01
Information Content per bp:1.530
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif102.7
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets99.5 +/- 58.1bp
Average Position of motif in Background98.1 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTCA---
TTATTAGTACATAN

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTCA------
NNNTTAGTTAACTNANN

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTCA------
NTTTTAGTTAACNNAGN

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTAGTTCA-----
ANNNCTAGTTAACNGNN

MA0072.1_RORA_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TTAGTTCA-
TATAAGTAGGTCAA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTAGTTCA
--AGGTCA

PH0081.1_Pdx1/Jaspar

Match Rank:7
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------TTAGTTCA-
AAGGTAATTAGCTCAT

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TTAGTTCA---
TNNTCCTTTGTTCTNNT

PH0128.1_Otp/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TTAGTTCA----
CGTAATTAATTAATTGG

PH0153.1_Prop1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGTTCA----
GNNTNTTAATTAATNCN