Information for motif6


Reverse Opposite:

p-value:1e-23
log p-value:-5.315e+01
Information Content per bp:1.621
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.9 +/- 54.7bp
Average Position of motif in Background59.9 +/- 63.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTACCCAGGTTG
HTTTCCCASG---

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTACCCAGGTTG-
---NNCAGGTGNN

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTACCCAGGTTG-
GANGTTAACTAGTTTNN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTACCCAGGTTG-----
ATCCACAGGTGCGAAAA

MA0103.2_ZEB1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTACCCAGGTTG--
-----CAGGTGAGG

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTACCCAGGTTG--
ATTTCCCAGVAKSCY

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTACCCAGGTTG
---CACAGN---

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTACCCAGGTTG
NNNGTAACTANGNNA

MA0072.1_RORA_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTACCCAGGTTG-
TTGACCTANTTATN

MA0088.1_znf143/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTACCCAGGTTG------
GATTTCCCATAATGCCTTGC