Information for motif11


Reverse Opposite:

p-value:1e-36
log p-value:-8.508e+01
Information Content per bp:1.700
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.0 +/- 53.6bp
Average Position of motif in Background85.0 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGTAGTAGTCT
TTATGTACTAATAA

MA0027.1_En1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATGTAGTAGTCT
AAGTAGTGCCC-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:ATGTAGTAGTCT--
------TWGTCTGV

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------ATGTAGTAGTCT
AAAATACATGTAAAAAT--

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------ATGTAGTAGTCT
AATATACATGTAAAATT--

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------ATGTAGTAGTCT
AAAATACATGTAATACT--

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------ATGTAGTAGTCT
AATATACATGTAATATA--

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATGTAGTAGTCT----
NTNNNAGGAGTCTCNTN

PH0082.1_Irx2/Jaspar

Match Rank:9
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------ATGTAGTAGTCT
TAAATACATGTAAAATT--

MA0032.1_FOXC1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATGTAGTAGTCT
GGTAAGTA-------