Information for motif12


Reverse Opposite:

p-value:1e-35
log p-value:-8.183e+01
Information Content per bp:1.446
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.6 +/- 62.3bp
Average Position of motif in Background193.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGAGCGCGCT
--AGCGCGCC

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGAGCGCGCT---
TGGCGCGCGCGCCTGA

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGAGCGCGCT---
ANCGCGCGCCCTTNN

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGAGCGCGCT---
NTCGCGCGCCTTNNN

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CGAGCGCGCT-
------NGCTN

MA0506.1_NRF1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGAGCGCGCT
GCGCCTGCGCA

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CGAGCGCGCT---
TTGGGGGCGCCCCTAG

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CGAGCGCGCT
CTGCGCATGCGC-

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CGAGCGCGCT
----CACGCA

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGCGCGCT
NNNACCGAGAGTNNN