Information for motif13


Reverse Opposite:

p-value:1e-35
log p-value:-8.183e+01
Information Content per bp:1.697
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.4 +/- 55.6bp
Average Position of motif in Background174.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATCCCTGCTAG-
-CCCCCTGCTGTG

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GATCCCTGCTAG
AAATCACTGC---

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GATCCCTGCTAG---
CAATCACTGGCAGAAT

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GATCCCTGCTAG----
-TCNCCTGCTGNGNNN

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GATCCCTGCTAG----
-TNTCCTGCTGTGNNG

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GATCCCTGCTAG
NNNNTGAGCACTGTNNG

MA0483.1_Gfi1b/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GATCCCTGCTAG
AAATCACAGCA--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GATCCCTGCTAG
RCATTCCWGG---

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GATCCCTGCTAG
ATTTCCTGTN--

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GATCCCTGCTAG
NNNNTTGACCCCTNNNN-