Information for motif14


Reverse Opposite:

p-value:1e-32
log p-value:-7.541e+01
Information Content per bp:1.768
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets118.9 +/- 52.4bp
Average Position of motif in Background105.6 +/- 39.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ATACTRAGGTGA-
AAACATAATGAGGTTGC

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATACTRAGGTGA-
GACGATAATGAGCTTGC

MA0595.1_SREBF1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ATACTRAGGTGA-
---GTGGGGTGAT

MA0596.1_SREBF2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATACTRAGGTGA-
---ATGGGGTGAT

MA0124.1_NKX3-1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATACTRAGGTGA
ATACTTA-----

MA0072.1_RORA_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATACTRAGGTGA-
TATAAGTAGGTCAA

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ATACTRAGGTGA----
-----CAGGTAAGTAT

MA0071.1_RORA_1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATACTRAGGTGA
--ATCAAGGTCA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ATACTRAGGTGA--
------AGGTGTCA

MA0103.2_ZEB1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATACTRAGGTGA--
-----CAGGTGAGG