Information for motif15


Reverse Opposite:

p-value:1e-32
log p-value:-7.468e+01
Information Content per bp:1.905
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets98.2 +/- 54.3bp
Average Position of motif in Background42.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:ACGTYACG
ACGTCA--

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ACGTYACG-
GTGACGTCACCG

MA0018.2_CREB1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ACGTYACG
TGACGTCA--

MA0067.1_Pax2/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACGTYACG-
-AGTCACGC

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACGTYACG
TGACGTCATC

PB0004.1_Atf1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------ACGTYACG--
ACGATGACGTCATCGA

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACGTYACG
TCACGTGACC

E-box(HLH)/Promoter/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACGTYACG--
TCACGTGACCGG

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACGTYACG
BGCACGTA---

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACGTYACG
CACGTGDC-