Information for motif18


Reverse Opposite:

p-value:1e-31
log p-value:-7.199e+01
Information Content per bp:1.844
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets95.1 +/- 61.8bp
Average Position of motif in Background78.5 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0052.2_MEF2A/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACGCTAAAAA------
-AGCTAAAAATAGCAT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACGCTAAAAA---
TACTGGAAAAAAAA

MA0030.1_FOXF2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACGCTAAAAA--
CAAACGTAAACAAT

MA0497.1_MEF2C/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACGCTAAAAA-----
ATGCTAAAAATAGAA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACGCTAAAAA----
--DCYAAAAATAGM

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACGCTAAAAA--
ATTTACGACAAATAGC

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACGCTAAAAA----
AGGACGCTGTAAAGGGA

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACGCTAAAAA-----
AAAAAGTAAACAAACAC

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACGCTAAAAA
-NGCTN----

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACGCTAAAAA--------
---GTATAAAAGGCGGGG